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Topic · genomics

genomics

Tracked open-source repos tagged genomics, sorted by stars.

36 repos
  • sarek↗@nf-core

    Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

    ★ 599+4Star change over the last 7 days
  • snippy↗@tseemann

    :scissors: :zap: Rapid haploid variant calling and core genome alignment

    ★ 592+1Star change over the last 7 days
  • enformer-pytorch↗@lucidrains

    Implementation of Enformer, Deepmind's attention network for predicting gene expression, in Pytorch

    ★ 574+0Star change over the last 7 days
  • jvarkit↗@lindenb

    Java utilities for Bioinformatics

    ★ 525+0Star change over the last 7 days
  • awesome-omics↗@flowhub-team

    A collection of awesome things regarding all omics.

    ★ 503+1Star change over the last 7 days
  • maftools↗@PoisonAlien

    Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.

    ★ 502+1Star change over the last 7 days
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