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Topic · ngs

ngs

Tracked open-source repos tagged ngs, sorted by stars.

Repos
9
Total stars
13,694
Avg. stars
1,522
Share
0.00%

Topics that frequently appear alongside ngs on the same repo.

Recent risers

Repos created in the last 90 days, tagged ngs.

No new repos tagged with this topic in the last 90 days.

  • deepvariant@google

    DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

    3,799+10Star change over the last 7 days
  • fastp@OpenGene

    An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

    2,423+3Star change over the last 7 days
  • gatk@broadinstitute

    Official code repository for GATK versions 4 and up

    1,993+6Star change over the last 7 days
  • galaxy@galaxyproject

    Data intensive science for everyone.

    1,844+3Star change over the last 7 days
  • htslib@samtools

    C library for high-throughput sequencing data formats

    946+3Star change over the last 7 days
  • pysam@pysam-developers

    Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtools, bcftools, and tabix.

    908+3Star change over the last 7 days
  • deepTools@deeptools

    Tools to process and analyze deep sequencing data.

    763+0Star change over the last 7 days
  • jvarkit@lindenb

    Java utilities for Bioinformatics

    525+1Star change over the last 7 days
  • awesome-omics@flowhub-team

    A collection of awesome things regarding all omics.

    503+0Star change over the last 7 days
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